Index

A

adiabatic_dmc (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) analyzer (pyvibdmc.ChainRuleHelper attribute) (pyvibdmc.simulation_utilities.ChainRuleHelper attribute) (pyvibdmc.simulation_utilities.imp_samp_helper.ChainRuleHelper attribute) AnalyzeWfn (class in pyvibdmc), [1] (class in pyvibdmc.analysis) (class in pyvibdmc.analysis.analyze_wfn) (class in pyvibdmc.simulation_utilities) atm_atm_dists() (pyvibdmc.DistIt method) (pyvibdmc.simulation_utilities.DistIt method) (pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors.DistIt method) (pyvibdmc.simulation_utilities.tensorflow_descriptors.DistIt method)

atomic_units (pyvibdmc.Constants attribute) (pyvibdmc.simulation_utilities.Constants attribute) (pyvibdmc.simulation_utilities.Constants.Constants attribute) atoms (pyvibdmc.DMC_Sim attribute) (pyvibdmc.HarmonicAnalysis attribute) (pyvibdmc.InitialConditioner attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) (pyvibdmc.simulation_utilities.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.initial_conditioner.InitialConditioner attribute) (pyvibdmc.simulation_utilities.initial_conditioner.InitialConditioner attribute) (pyvibdmc.simulation_utilities.InitialConditioner attribute)

B

birth_or_death() (pyvibdmc.DMC_Sim method) (pyvibdmc.pyvibdmc.DMC_Sim method) birth_or_death_old() (pyvibdmc.DMC_Sim method) (pyvibdmc.pyvibdmc.DMC_Sim method) bisecting_vector() (pyvibdmc.analysis.analyze_wfn.AnalyzeWfn method) (pyvibdmc.analysis.AnalyzeWfn method) (pyvibdmc.AnalyzeWfn method), [1] (pyvibdmc.simulation_utilities.AnalyzeWfn method) bond_angle() (pyvibdmc.analysis.analyze_wfn.AnalyzeWfn method) (pyvibdmc.analysis.AnalyzeWfn method) (pyvibdmc.AnalyzeWfn method), [1] (pyvibdmc.simulation_utilities.AnalyzeWfn method)

bond_length() (pyvibdmc.analysis.analyze_wfn.AnalyzeWfn method) (pyvibdmc.analysis.AnalyzeWfn method) (pyvibdmc.AnalyzeWfn method), [1] (pyvibdmc.simulation_utilities.AnalyzeWfn method) branch_every (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute)

C

calc_desc_wts() (pyvibdmc.DMC_Sim method) (pyvibdmc.pyvibdmc.DMC_Sim method) calc_vref() (pyvibdmc.DMC_Sim method) (pyvibdmc.pyvibdmc.DMC_Sim method) call_derivs() (pyvibdmc.ImpSampManager method) (pyvibdmc.ImpSampManager_NoMP method) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager method) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager_NoMP method) (pyvibdmc.simulation_utilities.ImpSampManager method) (pyvibdmc.simulation_utilities.ImpSampManager_NoMP method) (pyvibdmc.simulation_utilities.mpi_imp_samp_manager.MPI_ImpSampManager method) call_imp_func() (pyvibdmc.ImpSampManager_NoMP method) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager_NoMP method) (pyvibdmc.simulation_utilities.ImpSampManager_NoMP method) call_trial() (pyvibdmc.ImpSampManager method) (pyvibdmc.ImpSampManager_NoMP method) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager method) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager_NoMP method) (pyvibdmc.simulation_utilities.ImpSampManager method) (pyvibdmc.simulation_utilities.ImpSampManager_NoMP method) (pyvibdmc.simulation_utilities.mpi_imp_samp_manager.MPI_ImpSampManager method) call_trial_no_mp() (pyvibdmc.ImpSampManager method) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager method) (pyvibdmc.simulation_utilities.ImpSampManager method) (pyvibdmc.simulation_utilities.mpi_imp_samp_manager.MPI_ImpSampManager method) cart_to_spherical() (pyvibdmc.analysis.analyze_wfn.AnalyzeWfn static method) (pyvibdmc.analysis.AnalyzeWfn static method) (pyvibdmc.AnalyzeWfn static method), [1] (pyvibdmc.simulation_utilities.AnalyzeWfn static method) cds (pyvibdmc.ChainRuleHelper attribute) (pyvibdmc.simulation_utilities.ChainRuleHelper attribute) (pyvibdmc.simulation_utilities.imp_samp_helper.ChainRuleHelper attribute) ch_dir (pyvibdmc.NN_Potential attribute) (pyvibdmc.Potential_NoMP attribute) (pyvibdmc.simulation_utilities.NN_Potential attribute), [1] (pyvibdmc.simulation_utilities.potential_manager.NN_Potential attribute) (pyvibdmc.simulation_utilities.potential_manager.Potential_NoMP attribute) (pyvibdmc.simulation_utilities.Potential_NoMP attribute), [1]

ChainRuleHelper (class in pyvibdmc) (class in pyvibdmc.simulation_utilities) (class in pyvibdmc.simulation_utilities.imp_samp_helper) chdir (pyvibdmc.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.ImpSampManager_NoMP attribute) check_cupy() (pyvibdmc.DistIt method) (pyvibdmc.simulation_utilities.DistIt method) (pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors.DistIt method) (pyvibdmc.simulation_utilities.tensorflow_descriptors.DistIt method) chkpt() (pyvibdmc.simulation_utilities.sim_archive.SimArchivist static method) chkpt_every (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) Constants (class in pyvibdmc) (class in pyvibdmc.simulation_utilities) (class in pyvibdmc.simulation_utilities.Constants) cont_wt_thresh (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) convert() (pyvibdmc.Constants class method) (pyvibdmc.simulation_utilities.Constants class method) (pyvibdmc.simulation_utilities.Constants.Constants class method) coord (pyvibdmc.InitialConditioner attribute) (pyvibdmc.simulation_utilities.initial_conditioner.initial_conditioner.InitialConditioner attribute) (pyvibdmc.simulation_utilities.initial_conditioner.InitialConditioner attribute) (pyvibdmc.simulation_utilities.InitialConditioner attribute) create_filesystem() (pyvibdmc.simulation_utilities.file_manager.FileManager static method) cur_timestep (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute)

D

d2cth_dx2() (pyvibdmc.ChainRuleHelper method) (pyvibdmc.simulation_utilities.ChainRuleHelper method) (pyvibdmc.simulation_utilities.imp_samp_helper.ChainRuleHelper method) d2psidx2() (pyvibdmc.ChainRuleHelper method) (pyvibdmc.simulation_utilities.ChainRuleHelper method) (pyvibdmc.simulation_utilities.imp_samp_helper.ChainRuleHelper method) d2r_dx2() (pyvibdmc.ChainRuleHelper method) (pyvibdmc.simulation_utilities.ChainRuleHelper method) (pyvibdmc.simulation_utilities.imp_samp_helper.ChainRuleHelper method) d2th_dx2() (pyvibdmc.ChainRuleHelper method) (pyvibdmc.simulation_utilities.ChainRuleHelper method) (pyvibdmc.simulation_utilities.imp_samp_helper.ChainRuleHelper method) dcth_dx() (pyvibdmc.ChainRuleHelper method) (pyvibdmc.simulation_utilities.ChainRuleHelper method) (pyvibdmc.simulation_utilities.imp_samp_helper.ChainRuleHelper method) delete_future_checkpoints() (pyvibdmc.simulation_utilities.file_manager.FileManager static method) delete_older_checkpoints() (pyvibdmc.simulation_utilities.file_manager.FileManager static method) delta_t (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) deriv_func (pyvibdmc.ImpSampManager attribute) (pyvibdmc.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.ImpSampManager attribute) (pyvibdmc.simulation_utilities.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.mpi_imp_samp_manager.MPI_ImpSampManager attribute) deriv_kwargs (pyvibdmc.ImpSampManager attribute) (pyvibdmc.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.ImpSampManager attribute) (pyvibdmc.simulation_utilities.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.mpi_imp_samp_manager.MPI_ImpSampManager attribute) desc_wt_time_steps (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) diagonalize() (pyvibdmc.HarmonicAnalysis method) (pyvibdmc.simulation_utilities.HarmonicAnalysis method) (pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis.HarmonicAnalysis method) (pyvibdmc.simulation_utilities.initial_conditioner.HarmonicAnalysis method) differentiate() (pyvibdmc.MolFiniteDifference class method) (pyvibdmc.simulation_utilities.initial_conditioner.finite_difference.MolFiniteDifference class method) (pyvibdmc.simulation_utilities.initial_conditioner.MolFiniteDifference class method) (pyvibdmc.simulation_utilities.MolFiniteDifference class method) dihedral() (pyvibdmc.analysis.analyze_wfn.AnalyzeWfn method) (pyvibdmc.analysis.AnalyzeWfn method) (pyvibdmc.AnalyzeWfn method), [1] (pyvibdmc.simulation_utilities.AnalyzeWfn method)

dipole (pyvibdmc.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.HarmonicAnalysis attribute) dipole_derivs() (pyvibdmc.HarmonicAnalysis method) (pyvibdmc.simulation_utilities.HarmonicAnalysis method) (pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis.HarmonicAnalysis method) (pyvibdmc.simulation_utilities.initial_conditioner.HarmonicAnalysis method) displace_along_nms() (pyvibdmc.InitialConditioner method) (pyvibdmc.simulation_utilities.initial_conditioner.initial_conditioner.InitialConditioner method) (pyvibdmc.simulation_utilities.initial_conditioner.InitialConditioner method) (pyvibdmc.simulation_utilities.InitialConditioner method) displace_molecule() (pyvibdmc.MolFiniteDifference static method) (pyvibdmc.simulation_utilities.initial_conditioner.finite_difference.MolFiniteDifference static method) (pyvibdmc.simulation_utilities.initial_conditioner.MolFiniteDifference static method) (pyvibdmc.simulation_utilities.MolFiniteDifference static method) dist_matrix() (pyvibdmc.DistIt method) (pyvibdmc.simulation_utilities.DistIt method) (pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors.DistIt method) (pyvibdmc.simulation_utilities.tensorflow_descriptors.DistIt method) DistIt (class in pyvibdmc) (class in pyvibdmc.simulation_utilities) (class in pyvibdmc.simulation_utilities.tensorflow_descriptors) (class in pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors) dmc_restart() (in module pyvibdmc) (in module pyvibdmc.pyvibdmc) DMC_Sim (class in pyvibdmc) (class in pyvibdmc.pyvibdmc) dot_pdt() (pyvibdmc.analysis.analyze_wfn.AnalyzeWfn static method) (pyvibdmc.analysis.AnalyzeWfn static method) (pyvibdmc.AnalyzeWfn static method), [1] (pyvibdmc.simulation_utilities.AnalyzeWfn static method) dpsidx() (pyvibdmc.ChainRuleHelper method) (pyvibdmc.simulation_utilities.ChainRuleHelper method) (pyvibdmc.simulation_utilities.imp_samp_helper.ChainRuleHelper method) dr_dx() (pyvibdmc.ChainRuleHelper method) (pyvibdmc.simulation_utilities.ChainRuleHelper method) (pyvibdmc.simulation_utilities.imp_samp_helper.ChainRuleHelper method) drift() (pyvibdmc.ImpSamp method) (pyvibdmc.simulation_utilities.imp_samp.ImpSamp method) (pyvibdmc.simulation_utilities.ImpSamp method) dth_dx() (pyvibdmc.ChainRuleHelper method) (pyvibdmc.simulation_utilities.ChainRuleHelper method) (pyvibdmc.simulation_utilities.imp_samp_helper.ChainRuleHelper method) dx (pyvibdmc.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.HarmonicAnalysis attribute)

E

eq_geom (pyvibdmc.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.HarmonicAnalysis attribute) eq_xyz (pyvibdmc.DistIt attribute) (pyvibdmc.simulation_utilities.DistIt attribute) (pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors.DistIt attribute) (pyvibdmc.simulation_utilities.tensorflow_descriptors.DistIt attribute) equil_steps (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) excited_state_imp_samp (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute)

exp_val() (pyvibdmc.analysis.analyze_wfn.AnalyzeWfn static method) (pyvibdmc.analysis.AnalyzeWfn static method) (pyvibdmc.AnalyzeWfn static method), [1] (pyvibdmc.simulation_utilities.AnalyzeWfn static method) extract_eulers() (pyvibdmc.analysis.MolRotator static method) (pyvibdmc.analysis.rotator.MolRotator static method) (pyvibdmc.MolRotator static method) extract_xyz() (pyvibdmc.simulation_utilities.xyz_npy.XYZNPY static method) (pyvibdmc.simulation_utilities.XYZNPY static method) (pyvibdmc.XYZNPY static method)

F

FileManager (class in pyvibdmc.simulation_utilities.file_manager) final_chkpt() (pyvibdmc.simulation_utilities.sim_logger.SimLogger method) finish_sim() (pyvibdmc.simulation_utilities.sim_logger.SimLogger method) finite_diff() (pyvibdmc.ImpSamp static method) (pyvibdmc.simulation_utilities.imp_samp.ImpSamp static method) (pyvibdmc.simulation_utilities.ImpSamp static method) fixed_node (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) fname (pyvibdmc.analysis.extract_sim_info.SimInfo attribute) (pyvibdmc.analysis.SimInfo attribute) (pyvibdmc.SimInfo attribute)

force_numpy (pyvibdmc.DistIt attribute) (pyvibdmc.simulation_utilities.DistIt attribute) (pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors.DistIt attribute) (pyvibdmc.simulation_utilities.tensorflow_descriptors.DistIt attribute) full_mat (pyvibdmc.DistIt attribute) (pyvibdmc.simulation_utilities.DistIt attribute) (pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors.DistIt attribute) (pyvibdmc.simulation_utilities.tensorflow_descriptors.DistIt attribute)

G

gen_disps() (pyvibdmc.InitialConditioner method) (pyvibdmc.simulation_utilities.initial_conditioner.initial_conditioner.InitialConditioner method) (pyvibdmc.simulation_utilities.initial_conditioner.InitialConditioner method) (pyvibdmc.simulation_utilities.InitialConditioner method) gen_eulers() (pyvibdmc.analysis.MolRotator static method) (pyvibdmc.analysis.rotator.MolRotator static method) (pyvibdmc.MolRotator static method) gen_rot_mats() (pyvibdmc.analysis.MolRotator static method) (pyvibdmc.analysis.rotator.MolRotator static method) (pyvibdmc.MolRotator static method) generate_hessian() (pyvibdmc.HarmonicAnalysis method) (pyvibdmc.simulation_utilities.HarmonicAnalysis method) (pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis.HarmonicAnalysis method) (pyvibdmc.simulation_utilities.initial_conditioner.HarmonicAnalysis method) get_atom_masses() (pyvibdmc.analysis.extract_sim_info.SimInfo method) (pyvibdmc.analysis.SimInfo method) (pyvibdmc.SimInfo method) get_atomic_num() (in module pyvibdmc) (in module pyvibdmc.simulation_utilities) (in module pyvibdmc.simulation_utilities.Constants) get_atomic_nums() (pyvibdmc.analysis.extract_sim_info.SimInfo method) (pyvibdmc.analysis.SimInfo method) (pyvibdmc.SimInfo method) get_atomic_string() (in module pyvibdmc) (in module pyvibdmc.simulation_utilities) (in module pyvibdmc.simulation_utilities.Constants) get_component() (pyvibdmc.analysis.analyze_wfn.AnalyzeWfn method) (pyvibdmc.analysis.AnalyzeWfn method) (pyvibdmc.AnalyzeWfn method), [1] (pyvibdmc.simulation_utilities.AnalyzeWfn method) get_pop() (pyvibdmc.analysis.extract_sim_info.SimInfo method) (pyvibdmc.analysis.SimInfo method) (pyvibdmc.SimInfo method)

get_prepped_vec() (pyvibdmc.DistIt method) (pyvibdmc.simulation_utilities.DistIt method) (pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors.DistIt method) (pyvibdmc.simulation_utilities.tensorflow_descriptors.DistIt method) get_training() (pyvibdmc.analysis.extract_sim_info.SimInfo static method) (pyvibdmc.analysis.SimInfo static method) (pyvibdmc.SimInfo static method) get_vref() (pyvibdmc.analysis.extract_sim_info.SimInfo method) (pyvibdmc.analysis.SimInfo method) (pyvibdmc.SimInfo method) get_wfn() (pyvibdmc.analysis.extract_sim_info.SimInfo static method) (pyvibdmc.analysis.SimInfo static method) (pyvibdmc.SimInfo static method) get_wfns() (pyvibdmc.analysis.extract_sim_info.SimInfo method) (pyvibdmc.analysis.SimInfo method) (pyvibdmc.SimInfo method) get_zpe() (pyvibdmc.analysis.extract_sim_info.SimInfo method) (pyvibdmc.analysis.SimInfo method) (pyvibdmc.SimInfo method) getpot() (pyvibdmc.NN_Potential method) (pyvibdmc.Potential method) (pyvibdmc.Potential_Direct method) (pyvibdmc.Potential_NoMP method) (pyvibdmc.simulation_utilities.mpi_potential_manager.MPI_Potential method) (pyvibdmc.simulation_utilities.NN_Potential method), [1] (pyvibdmc.simulation_utilities.Potential method), [1] (pyvibdmc.simulation_utilities.Potential_Direct method) (pyvibdmc.simulation_utilities.potential_manager.NN_Potential method) (pyvibdmc.simulation_utilities.potential_manager.Potential method) (pyvibdmc.simulation_utilities.potential_manager.Potential_Direct method) (pyvibdmc.simulation_utilities.potential_manager.Potential_NoMP method) (pyvibdmc.simulation_utilities.Potential_NoMP method), [1]

H

HarmonicAnalysis (class in pyvibdmc) (class in pyvibdmc.simulation_utilities) (class in pyvibdmc.simulation_utilities.initial_conditioner) (class in pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis)

I

imp1d (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) imp_manager (pyvibdmc.ImpSamp attribute) (pyvibdmc.simulation_utilities.imp_samp.ImpSamp attribute) (pyvibdmc.simulation_utilities.ImpSamp attribute) imp_move_randomly() (pyvibdmc.DMC_Sim method) (pyvibdmc.pyvibdmc.DMC_Sim method) imp_move_randomly_second_type() (pyvibdmc.DMC_Sim method) (pyvibdmc.pyvibdmc.DMC_Sim method) ImpSamp (class in pyvibdmc) (class in pyvibdmc.simulation_utilities) (class in pyvibdmc.simulation_utilities.imp_samp) impsamp_manager (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute)

ImpSampManager (class in pyvibdmc) (class in pyvibdmc.simulation_utilities) (class in pyvibdmc.simulation_utilities.imp_samp_manager) ImpSampManager_NoMP (class in pyvibdmc) (class in pyvibdmc.simulation_utilities) (class in pyvibdmc.simulation_utilities.imp_samp_manager) inited (in module pyvibdmc.simulation_utilities.mpi_imp_samp_manager) InitialConditioner (class in pyvibdmc) (class in pyvibdmc.simulation_utilities) (class in pyvibdmc.simulation_utilities.initial_conditioner) (class in pyvibdmc.simulation_utilities.initial_conditioner.initial_conditioner) initwrapper() (pyvibdmc.simulation_utilities.mpi_imp_samp_manager.MPI_ImpSampManager method) (pyvibdmc.simulation_utilities.mpi_potential_manager.MPI_Potential method)

L

local_kin() (pyvibdmc.ImpSamp static method) (pyvibdmc.simulation_utilities.imp_samp.ImpSamp static method) (pyvibdmc.simulation_utilities.ImpSamp static method)

log_every (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute)

M

mass() (pyvibdmc.Constants class method) (pyvibdmc.simulation_utilities.Constants class method) (pyvibdmc.simulation_utilities.Constants.Constants class method) masses (pyvibdmc.DMC_Sim attribute) (pyvibdmc.HarmonicAnalysis attribute) (pyvibdmc.InitialConditioner attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) (pyvibdmc.simulation_utilities.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.initial_conditioner.InitialConditioner attribute) (pyvibdmc.simulation_utilities.initial_conditioner.InitialConditioner attribute) (pyvibdmc.simulation_utilities.InitialConditioner attribute) method (pyvibdmc.DistIt attribute) (pyvibdmc.simulation_utilities.DistIt attribute) (pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors.DistIt attribute) (pyvibdmc.simulation_utilities.tensorflow_descriptors.DistIt attribute) metropolis() (pyvibdmc.ImpSamp static method) (pyvibdmc.simulation_utilities.imp_samp.ImpSamp static method) (pyvibdmc.simulation_utilities.ImpSamp static method) model (pyvibdmc.NN_Potential attribute) (pyvibdmc.simulation_utilities.NN_Potential attribute), [1] (pyvibdmc.simulation_utilities.potential_manager.NN_Potential attribute) module pyvibdmc pyvibdmc.analysis pyvibdmc.analysis.analyze_wfn pyvibdmc.analysis.extract_sim_info pyvibdmc.analysis.plotter pyvibdmc.analysis.rotator pyvibdmc.pyvibdmc pyvibdmc.simulation_utilities pyvibdmc.simulation_utilities.Constants pyvibdmc.simulation_utilities.file_manager pyvibdmc.simulation_utilities.imp_samp pyvibdmc.simulation_utilities.imp_samp_helper pyvibdmc.simulation_utilities.imp_samp_manager pyvibdmc.simulation_utilities.initial_conditioner pyvibdmc.simulation_utilities.initial_conditioner.finite_difference pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis pyvibdmc.simulation_utilities.initial_conditioner.initial_conditioner pyvibdmc.simulation_utilities.mpi_imp_samp_manager pyvibdmc.simulation_utilities.mpi_potential_manager pyvibdmc.simulation_utilities.potential_manager pyvibdmc.simulation_utilities.sim_archive pyvibdmc.simulation_utilities.sim_logger pyvibdmc.simulation_utilities.tensorflow_descriptors pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors pyvibdmc.simulation_utilities.xyz_npy

MolFiniteDifference (class in pyvibdmc) (class in pyvibdmc.simulation_utilities) (class in pyvibdmc.simulation_utilities.initial_conditioner) (class in pyvibdmc.simulation_utilities.initial_conditioner.finite_difference) MolRotator (class in pyvibdmc) (class in pyvibdmc.analysis) (class in pyvibdmc.analysis.rotator) move_randomly() (pyvibdmc.DMC_Sim method) (pyvibdmc.pyvibdmc.DMC_Sim method) mp_close() (pyvibdmc.Potential method) (pyvibdmc.simulation_utilities.Potential method), [1] (pyvibdmc.simulation_utilities.potential_manager.Potential method) MPI_ImpSampManager (class in pyvibdmc.simulation_utilities.mpi_imp_samp_manager) MPI_Potential (class in pyvibdmc.simulation_utilities.mpi_potential_manager)

N

NN_Potential (class in pyvibdmc) (class in pyvibdmc.simulation_utilities), [1] (class in pyvibdmc.simulation_utilities.potential_manager) nomp_pool_cores (pyvibdmc.ImpSampManager attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager attribute) (pyvibdmc.simulation_utilities.ImpSampManager attribute) num_cores (pyvibdmc.Potential attribute) (pyvibdmc.simulation_utilities.Potential attribute), [1] (pyvibdmc.simulation_utilities.potential_manager.Potential attribute) num_elems (pyvibdmc.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.HarmonicAnalysis attribute)

num_timesteps (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) num_walkers (pyvibdmc.DMC_Sim attribute) (pyvibdmc.InitialConditioner attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) (pyvibdmc.simulation_utilities.initial_conditioner.initial_conditioner.InitialConditioner attribute) (pyvibdmc.simulation_utilities.initial_conditioner.InitialConditioner attribute) (pyvibdmc.simulation_utilities.InitialConditioner attribute)

O

output_folder (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute)

P

params (pyvibdmc.analysis.Plotter attribute) (pyvibdmc.analysis.plotter.Plotter attribute) (pyvibdmc.Plotter attribute) pass_timestep (pyvibdmc.ImpSampManager attribute) (pyvibdmc.ImpSampManager_NoMP attribute) (pyvibdmc.Potential attribute) (pyvibdmc.Potential_Direct attribute) (pyvibdmc.Potential_NoMP attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.ImpSampManager attribute) (pyvibdmc.simulation_utilities.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.mpi_imp_samp_manager.MPI_ImpSampManager attribute) (pyvibdmc.simulation_utilities.mpi_potential_manager.MPI_Potential attribute) (pyvibdmc.simulation_utilities.Potential attribute), [1] (pyvibdmc.simulation_utilities.Potential_Direct attribute) (pyvibdmc.simulation_utilities.potential_manager.Potential attribute) (pyvibdmc.simulation_utilities.potential_manager.Potential_Direct attribute) (pyvibdmc.simulation_utilities.potential_manager.Potential_NoMP attribute) (pyvibdmc.simulation_utilities.Potential_NoMP attribute), [1] Plotter (class in pyvibdmc) (class in pyvibdmc.analysis) (class in pyvibdmc.analysis.plotter) plt_hist1d() (pyvibdmc.analysis.Plotter static method) (pyvibdmc.analysis.plotter.Plotter static method) (pyvibdmc.Plotter static method) plt_hist2d() (pyvibdmc.analysis.Plotter static method) (pyvibdmc.analysis.plotter.Plotter static method) (pyvibdmc.Plotter static method) plt_pop_vs_tau() (pyvibdmc.analysis.Plotter static method) (pyvibdmc.analysis.plotter.Plotter static method) (pyvibdmc.Plotter static method) plt_vref_vs_tau() (pyvibdmc.analysis.Plotter static method) (pyvibdmc.analysis.plotter.Plotter static method) (pyvibdmc.Plotter static method) points_diag (pyvibdmc.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.HarmonicAnalysis attribute) points_off_diag (pyvibdmc.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.HarmonicAnalysis attribute) pool (pyvibdmc.Potential property) (pyvibdmc.simulation_utilities.Potential property), [1] (pyvibdmc.simulation_utilities.potential_manager.Potential property) pot_kwargs (pyvibdmc.NN_Potential attribute) (pyvibdmc.Potential attribute) (pyvibdmc.Potential_Direct attribute) (pyvibdmc.Potential_NoMP attribute) (pyvibdmc.simulation_utilities.mpi_potential_manager.MPI_Potential attribute) (pyvibdmc.simulation_utilities.NN_Potential attribute), [1] (pyvibdmc.simulation_utilities.Potential attribute), [1] (pyvibdmc.simulation_utilities.Potential_Direct attribute) (pyvibdmc.simulation_utilities.potential_manager.NN_Potential attribute) (pyvibdmc.simulation_utilities.potential_manager.Potential attribute) (pyvibdmc.simulation_utilities.potential_manager.Potential_Direct attribute) (pyvibdmc.simulation_utilities.potential_manager.Potential_NoMP attribute) (pyvibdmc.simulation_utilities.Potential_NoMP attribute), [1] pot_manager (pyvibdmc.ImpSampManager attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager attribute) (pyvibdmc.simulation_utilities.ImpSampManager attribute) (pyvibdmc.simulation_utilities.mpi_imp_samp_manager.MPI_ImpSampManager attribute) Potential (class in pyvibdmc) (class in pyvibdmc.simulation_utilities), [1] (class in pyvibdmc.simulation_utilities.potential_manager) potential (pyvibdmc.DMC_Sim attribute) (pyvibdmc.HarmonicAnalysis attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) (pyvibdmc.simulation_utilities.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis.HarmonicAnalysis attribute) (pyvibdmc.simulation_utilities.initial_conditioner.HarmonicAnalysis attribute) Potential_Direct (class in pyvibdmc) (class in pyvibdmc.simulation_utilities) (class in pyvibdmc.simulation_utilities.potential_manager) potential_directory (pyvibdmc.Potential attribute) (pyvibdmc.Potential_NoMP attribute) (pyvibdmc.simulation_utilities.mpi_potential_manager.MPI_Potential attribute) (pyvibdmc.simulation_utilities.Potential attribute), [1] (pyvibdmc.simulation_utilities.potential_manager.Potential attribute) (pyvibdmc.simulation_utilities.potential_manager.Potential_NoMP attribute) (pyvibdmc.simulation_utilities.Potential_NoMP attribute), [1] potential_function (pyvibdmc.Potential attribute) (pyvibdmc.Potential_Direct attribute) (pyvibdmc.Potential_NoMP attribute) (pyvibdmc.simulation_utilities.mpi_potential_manager.MPI_Potential attribute) (pyvibdmc.simulation_utilities.Potential attribute), [1] (pyvibdmc.simulation_utilities.Potential_Direct attribute) (pyvibdmc.simulation_utilities.potential_manager.Potential attribute) (pyvibdmc.simulation_utilities.potential_manager.Potential_Direct attribute) (pyvibdmc.simulation_utilities.potential_manager.Potential_NoMP attribute) (pyvibdmc.simulation_utilities.Potential_NoMP attribute), [1]

potential_info (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) Potential_NoMP (class in pyvibdmc) (class in pyvibdmc.simulation_utilities), [1] (class in pyvibdmc.simulation_utilities.potential_manager) prep_imp() (pyvibdmc.simulation_utilities.mpi_imp_samp_manager.MPI_ImpSampManager method) prep_pot() (pyvibdmc.simulation_utilities.mpi_potential_manager.MPI_Potential method) projection_1d() (pyvibdmc.analysis.analyze_wfn.AnalyzeWfn static method) (pyvibdmc.analysis.AnalyzeWfn static method) (pyvibdmc.AnalyzeWfn static method), [1] (pyvibdmc.simulation_utilities.AnalyzeWfn static method) projection_2d() (pyvibdmc.analysis.analyze_wfn.AnalyzeWfn static method) (pyvibdmc.analysis.AnalyzeWfn static method) (pyvibdmc.AnalyzeWfn static method), [1] (pyvibdmc.simulation_utilities.AnalyzeWfn static method) propagate() (pyvibdmc.DMC_Sim method) (pyvibdmc.pyvibdmc.DMC_Sim method) python_file (pyvibdmc.ImpSampManager attribute) (pyvibdmc.ImpSampManager_NoMP attribute) (pyvibdmc.Potential attribute) (pyvibdmc.Potential_NoMP attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.ImpSampManager attribute) (pyvibdmc.simulation_utilities.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.mpi_imp_samp_manager.MPI_ImpSampManager attribute) (pyvibdmc.simulation_utilities.mpi_potential_manager.MPI_Potential attribute) (pyvibdmc.simulation_utilities.Potential attribute), [1] (pyvibdmc.simulation_utilities.potential_manager.Potential attribute) (pyvibdmc.simulation_utilities.potential_manager.Potential_NoMP attribute) (pyvibdmc.simulation_utilities.Potential_NoMP attribute), [1] pyvibdmc module pyvibdmc.analysis module pyvibdmc.analysis.analyze_wfn module pyvibdmc.analysis.extract_sim_info module pyvibdmc.analysis.plotter module pyvibdmc.analysis.rotator module pyvibdmc.pyvibdmc module pyvibdmc.simulation_utilities module pyvibdmc.simulation_utilities.Constants module pyvibdmc.simulation_utilities.file_manager module pyvibdmc.simulation_utilities.imp_samp module pyvibdmc.simulation_utilities.imp_samp_helper module pyvibdmc.simulation_utilities.imp_samp_manager module pyvibdmc.simulation_utilities.initial_conditioner module pyvibdmc.simulation_utilities.initial_conditioner.finite_difference module pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis module pyvibdmc.simulation_utilities.initial_conditioner.initial_conditioner module pyvibdmc.simulation_utilities.mpi_imp_samp_manager module pyvibdmc.simulation_utilities.mpi_potential_manager module pyvibdmc.simulation_utilities.potential_manager module pyvibdmc.simulation_utilities.sim_archive module pyvibdmc.simulation_utilities.sim_logger module pyvibdmc.simulation_utilities.tensorflow_descriptors module pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors module pyvibdmc.simulation_utilities.xyz_npy module

R

recrossing() (pyvibdmc.DMC_Sim method) (pyvibdmc.pyvibdmc.DMC_Sim method) reduced_mass() (pyvibdmc.Constants class method) (pyvibdmc.simulation_utilities.Constants class method) (pyvibdmc.simulation_utilities.Constants.Constants class method) reload_sim() (pyvibdmc.simulation_utilities.sim_archive.SimArchivist static method) rotate_geoms() (pyvibdmc.analysis.MolRotator static method) (pyvibdmc.analysis.rotator.MolRotator static method) (pyvibdmc.MolRotator static method) rotate_to_xy_plane() (pyvibdmc.analysis.MolRotator static method) (pyvibdmc.analysis.rotator.MolRotator static method) (pyvibdmc.MolRotator static method) rotate_vec() (pyvibdmc.analysis.MolRotator static method) (pyvibdmc.analysis.rotator.MolRotator static method) (pyvibdmc.MolRotator static method) run() (pyvibdmc.DistIt method) (pyvibdmc.DMC_Sim method) (pyvibdmc.HarmonicAnalysis method) (pyvibdmc.InitialConditioner method) (pyvibdmc.pyvibdmc.DMC_Sim method) (pyvibdmc.simulation_utilities.DistIt method) (pyvibdmc.simulation_utilities.HarmonicAnalysis method) (pyvibdmc.simulation_utilities.initial_conditioner.harmonic_analysis.HarmonicAnalysis method) (pyvibdmc.simulation_utilities.initial_conditioner.HarmonicAnalysis method) (pyvibdmc.simulation_utilities.initial_conditioner.initial_conditioner.InitialConditioner method) (pyvibdmc.simulation_utilities.initial_conditioner.InitialConditioner method) (pyvibdmc.simulation_utilities.InitialConditioner method) (pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors.DistIt method) (pyvibdmc.simulation_utilities.tensorflow_descriptors.DistIt method)

run_harm() (pyvibdmc.InitialConditioner method) (pyvibdmc.simulation_utilities.initial_conditioner.initial_conditioner.InitialConditioner method) (pyvibdmc.simulation_utilities.initial_conditioner.InitialConditioner method) (pyvibdmc.simulation_utilities.InitialConditioner method) run_permute() (pyvibdmc.InitialConditioner method) (pyvibdmc.simulation_utilities.initial_conditioner.initial_conditioner.InitialConditioner method) (pyvibdmc.simulation_utilities.initial_conditioner.InitialConditioner method) (pyvibdmc.simulation_utilities.InitialConditioner method)

S

save_h5() (pyvibdmc.simulation_utilities.sim_archive.SimArchivist static method) second_impsamp_displacement (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) sim_name (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) SimArchivist (class in pyvibdmc.simulation_utilities.sim_archive) SimInfo (class in pyvibdmc) (class in pyvibdmc.analysis) (class in pyvibdmc.analysis.extract_sim_info) SimLogger (class in pyvibdmc.simulation_utilities.sim_logger) sort_atoms() (pyvibdmc.DistIt method) (pyvibdmc.simulation_utilities.DistIt method) (pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors.DistIt method) (pyvibdmc.simulation_utilities.tensorflow_descriptors.DistIt method) sort_groups() (pyvibdmc.DistIt method) (pyvibdmc.simulation_utilities.DistIt method) (pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors.DistIt method) (pyvibdmc.simulation_utilities.tensorflow_descriptors.DistIt method)

sorted_atoms (pyvibdmc.DistIt attribute) (pyvibdmc.simulation_utilities.DistIt attribute) (pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors.DistIt attribute) (pyvibdmc.simulation_utilities.tensorflow_descriptors.DistIt attribute) sorted_groups (pyvibdmc.DistIt attribute) (pyvibdmc.simulation_utilities.DistIt attribute) (pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors.DistIt attribute) (pyvibdmc.simulation_utilities.tensorflow_descriptors.DistIt attribute) start_cont_wts (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) start_structures (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute)

T

technique (pyvibdmc.InitialConditioner attribute) (pyvibdmc.simulation_utilities.initial_conditioner.initial_conditioner.InitialConditioner attribute) (pyvibdmc.simulation_utilities.initial_conditioner.InitialConditioner attribute) (pyvibdmc.simulation_utilities.InitialConditioner attribute) technique_kwargs (pyvibdmc.InitialConditioner attribute) (pyvibdmc.simulation_utilities.initial_conditioner.initial_conditioner.InitialConditioner attribute) (pyvibdmc.simulation_utilities.initial_conditioner.InitialConditioner attribute) (pyvibdmc.simulation_utilities.InitialConditioner attribute) trial() (pyvibdmc.ImpSamp method) (pyvibdmc.simulation_utilities.imp_samp.ImpSamp method) (pyvibdmc.simulation_utilities.ImpSamp method) trial_dir (pyvibdmc.ImpSampManager attribute) (pyvibdmc.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.ImpSampManager attribute) (pyvibdmc.simulation_utilities.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.mpi_imp_samp_manager.MPI_ImpSampManager attribute)

trial_fuc (pyvibdmc.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.mpi_imp_samp_manager.MPI_ImpSampManager attribute) trial_func (pyvibdmc.ImpSampManager attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager attribute) (pyvibdmc.simulation_utilities.ImpSampManager attribute) trial_kwargs (pyvibdmc.ImpSampManager attribute) (pyvibdmc.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager attribute) (pyvibdmc.simulation_utilities.imp_samp_manager.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.ImpSampManager attribute) (pyvibdmc.simulation_utilities.ImpSampManager_NoMP attribute) (pyvibdmc.simulation_utilities.mpi_imp_samp_manager.MPI_ImpSampManager attribute)

U

update_effetive_timestep() (pyvibdmc.DMC_Sim method) (pyvibdmc.pyvibdmc.DMC_Sim method)

update_sim_arrays() (pyvibdmc.DMC_Sim method) (pyvibdmc.pyvibdmc.DMC_Sim method)

V

versions (in module pyvibdmc)

vref_vs_tau (pyvibdmc.DMC_Sim property) (pyvibdmc.pyvibdmc.DMC_Sim property)

W

walkers (pyvibdmc.DMC_Sim property) (pyvibdmc.pyvibdmc.DMC_Sim property) weighting (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) weights_der1 (pyvibdmc.MolFiniteDifference attribute) (pyvibdmc.simulation_utilities.initial_conditioner.finite_difference.MolFiniteDifference attribute) (pyvibdmc.simulation_utilities.initial_conditioner.MolFiniteDifference attribute) (pyvibdmc.simulation_utilities.MolFiniteDifference attribute) weights_der2 (pyvibdmc.MolFiniteDifference attribute) (pyvibdmc.simulation_utilities.initial_conditioner.finite_difference.MolFiniteDifference attribute) (pyvibdmc.simulation_utilities.initial_conditioner.MolFiniteDifference attribute) (pyvibdmc.simulation_utilities.MolFiniteDifference attribute) wfn_every (pyvibdmc.DMC_Sim attribute) (pyvibdmc.pyvibdmc.DMC_Sim attribute) window_avg() (pyvibdmc.analysis.extract_sim_info.SimInfo method) (pyvibdmc.analysis.SimInfo method) (pyvibdmc.SimInfo method)

write_beginning() (pyvibdmc.simulation_utilities.sim_logger.SimLogger method) write_branching() (pyvibdmc.simulation_utilities.sim_logger.SimLogger method) write_chkpt() (pyvibdmc.simulation_utilities.sim_logger.SimLogger method) write_desc_wt() (pyvibdmc.simulation_utilities.sim_logger.SimLogger method) write_imp_disp_time() (pyvibdmc.simulation_utilities.sim_logger.SimLogger method) write_local() (pyvibdmc.simulation_utilities.sim_logger.SimLogger method) write_pot_time() (pyvibdmc.simulation_utilities.sim_logger.SimLogger method) write_rejections() (pyvibdmc.simulation_utilities.sim_logger.SimLogger method) write_ts() (pyvibdmc.simulation_utilities.sim_logger.SimLogger method) write_wfn_save() (pyvibdmc.simulation_utilities.sim_logger.SimLogger method) write_xyz() (pyvibdmc.simulation_utilities.xyz_npy.XYZNPY static method) (pyvibdmc.simulation_utilities.XYZNPY static method) (pyvibdmc.XYZNPY static method)

X

xp (pyvibdmc.ChainRuleHelper attribute) (pyvibdmc.simulation_utilities.ChainRuleHelper attribute) (pyvibdmc.simulation_utilities.imp_samp_helper.ChainRuleHelper attribute) xx (pyvibdmc.analysis.analyze_wfn.AnalyzeWfn attribute) (pyvibdmc.analysis.AnalyzeWfn attribute) (pyvibdmc.AnalyzeWfn attribute), [1] (pyvibdmc.simulation_utilities.AnalyzeWfn attribute)

XYZNPY (class in pyvibdmc) (class in pyvibdmc.simulation_utilities) (class in pyvibdmc.simulation_utilities.xyz_npy)

Z

zs (pyvibdmc.DistIt attribute) (pyvibdmc.simulation_utilities.DistIt attribute) (pyvibdmc.simulation_utilities.tensorflow_descriptors.distance_descriptors.DistIt attribute) (pyvibdmc.simulation_utilities.tensorflow_descriptors.DistIt attribute)